Tag Archives: academics

Do Journal Club Better (Tips for Dissecting a Clinical Research Article)

Journal club is a common teaching format used within academic programs to review recently published literature or other key articles selected within a specific domain. Journal clubs tend to be fairly informal and are amenable to small group in-person sessions, or they can be conducted virtually. An innovative hybrid format combining the traditional in-person departmental discussion with input from participants on social media has also been described. While there is no “right way” to run a journal club, it is helpful for moderators and presenters to use a structured approach to tackle a scientific article strategically and facilitate discussion.

The following tips are only suggestions. Clinical research has been my focus area, but this structure for interpreting a journal article may apply to other areas of research as well.

Background: Do the authors summarize previously published studies leading up to the present study? What don’t we already know about this topic?

  1. Do the authors do a good job justifying the reason for the study? This should not be lengthy if there is clearly a need for the study.
  2. Do the authors present a hypothesis? What is it?
  3. What is the primary aim/objective of the study? Do the authors specific secondary aims/objectives?

Study Design: Do the authors explicitly state the design used in the present study? If so, what is it?

Retrospective (“case-control study”): Starts with the outcome then looks back in time for exposure to risk factors or interventions.

  1. Can calculate odds ratios to estimate relative risk.
  2. Cannot calculate risk/incidence (not prospective).

Cross-sectional (“prevalence study”): Takes a snapshot of risk factors and outcome of interest at one point in time or over a specific period of time.

  1. Can calculate prevalence.
  2. Cannot calculate risk/incidence (not longitudinal).

Prospective: Considered the gold standard for clinical research. Studies may be observational or interventional/experimental. Check if the study is prospectively registered (e.g., clinicaltrials.gov) because most journals expect this. Even systematic reviews are encouraged to register prospectively now. the site PROSPERO is based in the United Kingdom.

Observational (“cohort study”).

  1. May or may not have a designated control group (can start with defined group and risk factors are discovered over time such as the Framingham Study).
  2. Can calculate incidence and relative risk for certain risk factors.
  3. Identify potential causal associations.

Interventional/Experimental (“clinical trial”).

  1. What is the intervention or experiment?
  2. Is there blinding? If so, who is blinded:  single, double, or triple (statistician blinded)?
  3. Are the groups randomized? How is this performed?
  4. Is there a sample size estimate and what is it based on (alpha and beta error, population mean and SD, expected effect size)? This should be centered around the primary outcome.
  5. What are the study groups? Are the groups independent or related?
  6. Is there a control group such as a placebo (for efficacy studies) or active comparator (standard of care)?

Measurements: How are the outcome variables operationalized? Check the validity, precision, and accuracy of the measurement tools (e.g., survey or measurement scale).

  1. Validity: Has the tool been used before? Is it reliable? Does the tool make sense (face validity)? Is the tool designed to measure the outcome of interest (construct validity)?
  2. Precision: Does the tool hit the target?
  3. Accuracy: Are the results reproducible?

Analysis: What statistical tests are used and are they appropriate? How do the authors define statistical significance (p-value or confidence intervals)? How are the results presented in the paper and are they clear?

  1. Categorical variables with independent groups: for 1 outcome and 2 groups, investigators commonly use the Chi square test (exact tests are used when n<5 in any field); for multiple outcomes or multiple groups, Kruskal Wallis with pairwise comparisons may be used although there are other options.
  2. Continuous variables with independent groups: for 1 outcome and 2 groups, investigators commonly use Student’s t test (if normal distribution) or Mann-Whitney U test (if distribution not normal); for multiple outcomes or multiple groups, analysis of variance (ANOVA) with post-hoc multiple comparisons testing; for multiple outcomes and multiple groups, especially with retrospective cohorts, regression modeling is often employed.
  3. Continuous variables with related groups (not independent): paired t test or repeated-measures ANOVA depending on the number of outcomes and groups.
  4. Are the results statistically significant? Clinically significant? Did the authors explain what they considered the minimal clinically important difference?
  5. Do the results make sense? Anything surprising or noteworthy?

Conclusions: I personally tend to skip the discussion section of the paper at first and come up with my own conclusions based on the study results; then I read what the authors have to say later.

  1. Did the authors succeed in proving what they set out to prove?
  2. Read the discussion section. Do you agree with the authors’ conclusions?
  3. What are possible future studies based on the results of the present study, and how would you design the next study?

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A Year Ends and a New One Begins

This academic year was truly like no other.

At the end of July, we graduated three new physician experts in regional anesthesiology and acute pain medicine (RAAPM), and I could not be more proud of them! From our welcome party in the summer of 2019 to a year’s worth of teaching sessions, socials, and medical missions to the opening of the new Stanford hospital, the #COVID19 pandemic and #BlackLivesMatter movement – what a year for our amazing grads! Check out this fantastic graduation video from Dr. Jody Leng:

Our graduating fellows surprised me with the honor of being their Teacher of the Year along with Dr. Ryan Derby! It is such a privilege to be part of our fellows’ training every year and see them grow into physician consultants with RAAPM expertise.

Our new fellows are off to a strong start and are now officially part of our Stanford RAAPM family! If you are interested in learning more about our fellowship program, please visit our fellowship website and contact me with any questions.

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My Favorite Rejections

I tweeted recently about the idea of keeping a “failure resume” which was recommended by an article published in the New York Times.

If I have learned one thing in academics, it’s this – you have to develop thick skin.

Continue reading My Favorite Rejections

Success in scientific journal publication is built on a pile of rejections. For every trainee and junior faculty member out there, know that your mentors have survived countless rejections (failures) to get to where they are today.

Rather than bemoan these rejections, perhaps we should celebrate them instead. Each failure can be a learning opportunity. I dug through some old emails to find a few of my favorite rejections and happily share them below. They fall into one of two general themes.

Theme 1: “It’s not you. It’s me.”

Theme 2: “It’s not me. It’s you.”

Don’t let these rejections get you down. Good research and good writing will eventually find a home in a journal. If you get stuck, reach out to a mentor for guidance. When you see your article published finally, you can look back at those earlier rejections as badges of honor and proof that persistence pays off.

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